jsisabella,
I also had my car in for the wind noise TSB which addresses the mirror flag area as the villian. I still have the noise and did some checking on my own.
With the window up, I took my key and started at the top front corner of the window. I gently pushed the key in towards the seal. I could do that for 5" and then key would no longer go in. The passenger side did not allow the key to go in at all. I stopped by the dealer and showed them. Some of their cars were like mine and the others the seal was tight.
Bottom line is if you followed what I tried to explain... is the window or the track needs to be adjusted for proper alignment. They will have to take the door apart... shudder shudder shaking in my boots at just the thought of them doing that. I was supposed to take it in this Friday but put it off till after the CA trip. I'm not taking any chance of them breaking something.
I'll keep you posted and good luck with yours.