Like he said. You lose NOTHING with an aftermarket deck unless you choose otherwise, the factor amp works just fine with an aftermarket headunit. A good quality aftermarket will provide you MUCH more capability and a MUCH better listening experience. If you want the stereo to come alive, do the speaker wiring mod that is stickied in the Audio and Electronics section and put a good headunit in. I'm telling you it will the best thing you ever did and you will get your full iPod integration...
Here's mine! My only decision hurdle was finding one that matched the interior...